Sequence Analysis
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Highlights
Identification of Multiple Sequences of Interest within a Target Sequence
Set Up a simple Graphical User Interface (GUI)
Genemap of Sars-CoV-2
Needleman Wunsch Algorithm
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0. Reference Table
1. First Steps in Sequence Analysis (Groundwork)
1.1 Color Strings in Terminal Output
1.2 Computation of Complement, Reverse and Reverse Complement of ssDNA
1.3 Identification of Sequences of Interest within a Target Sequence
1.4 Identification of Multiple Sequences of Interest within a Target Sequence
1.5 Data Grouping and Storage
2. Set Up a simple Graphical User Interface (GUI)
3. Mutations, Insertions and Deletions
3.1 Point Mutations
3.2 Needleman Wunsch Algorithm
4. K-mer-Analysis of a Sequence
4.1 Analysis of tRNA Using K-Fragmentation
5. Data Visualization
6. Appendix