Analysis of Bio-Images
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Highlights
Ellipse Fit on Cellular Nuclei
Voronoi Tesselation on Cells
Nuclei Masks on Tissue
Time lapse curvature determination
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1. Nuclei Detection on Fluorescence Images
1.1 First Analysis on 'Synthetic Cell'-Micrographs
1.2 Analysis on Real (Low Density) Cell Data
2. Tissue Analysis
2.1 Nuclei Analysis and Thresholding on Single Images
2.2 Analysis and Thresholding of GFAP Channel on Single Images
2.3 Single Image Presentation Within Tissue Array
2.4 Automated Analysis of Tissue Using the Parameters Determined Above
2.5 Autodetection of Highly Dense Cellular Regions by Next-Neighbor-Counting
3. Analysis of Time Series Recordings
3.1 Automated Curvature Inspection of Real Cells
4. Appendix